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» Pattern-based Ontology Construction
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NAR
2006
177views more  NAR 2006»
13 years 4 months ago
PUMA2 - grid-based high-throughput analysis of genomes and metabolic pathways
The PUMA2 system (available at http://compbio.mcs. 10 anl.gov/puma2) is an interactive, integrated bioinformatics environment for high-throughput genetic sequence analysis and met...
Natalia Maltsev, Elizabeth M. Glass, Dinanath Sula...
BMCBI
2004
207views more  BMCBI 2004»
13 years 4 months ago
Computational identification of transcription factor binding sites by functional analysis of sets of genes sharing overrep-resen
Background: Transcriptional regulation is a key mechanism in the functioning of the cell, and is mostly effected through transcription factors binding to specific recognition moti...
Davide Corà, Ferdinando Di Cunto, Paolo Pro...
CORR
2010
Springer
193views Education» more  CORR 2010»
13 years 3 months ago
A Probabilistic Approach for Learning Folksonomies from Structured Data
Learning structured representations has emerged as an important problem in many domains, including document and Web data mining, bioinformatics, and image analysis. One approach t...
Anon Plangprasopchok, Kristina Lerman, Lise Getoor
PROMISE
2010
12 years 11 months ago
Case-based reasoning vs parametric models for software quality optimization
Background: There are many data mining methods but few comparisons between them. For example, there are at least two ways to build quality optimizers, programs that find project o...
Adam Brady, Tim Menzies
BMCBI
2011
12 years 8 months ago
Assessing the functional coherence of modules found in multiple-evidence networks from Arabidopsis
Background: Combining multiple evidence-types from different information sources has the potential to reveal new relationships in biological systems. The integrated information ca...
Artem Lysenko, Michael Defoin-Platel, Keywan Hassa...