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» Pattern-based similarity search for microarray data
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CIDM
2007
IEEE
14 years 4 days ago
Mining Subspace Correlations
— In recent applications of clustering such as gene expression microarray analysis, collaborative filtering, and web mining, object similarity is no longer measured by physical ...
Rave Harpaz, Robert M. Haralick
SDM
2004
SIAM
187views Data Mining» more  SDM 2004»
13 years 7 months ago
Minimum Sum-Squared Residue Co-Clustering of Gene Expression Data
Microarray experiments have been extensively used for simultaneously measuring DNA expression levels of thousands of genes in genome research. A key step in the analysis of gene e...
Hyuk Cho, Inderjit S. Dhillon, Yuqiang Guan, Suvri...
BMCBI
2008
127views more  BMCBI 2008»
13 years 5 months ago
MetaMine - A tool to detect and analyse gene patterns in their environmental context
Background: Modern sequencing technologies allow rapid sequencing and bioinformatic analysis of genomes and metagenomes. With every new sequencing project a vast number of new pro...
Uta Bohnebeck, Thierry Lombardot, Renzo Kottmann, ...
BMCBI
2008
148views more  BMCBI 2008»
13 years 5 months ago
Discovering biclusters in gene expression data based on high-dimensional linear geometries
Background: In DNA microarray experiments, discovering groups of genes that share similar transcriptional characteristics is instrumental in functional annotation, tissue classifi...
Xiangchao Gan, Alan Wee-Chung Liew, Hong Yan
BMCBI
2006
91views more  BMCBI 2006»
13 years 5 months ago
In silico identification of putative promoter motifs of White Spot Syndrome Virus
Background: White Spot Syndrome Virus, a member of the virus family Nimaviridae, is a large dsDNA virus infecting shrimp and other crustacean species. Although limited information...
Hendrik Marks, Xin-Ying Ren, Hans Sandbrink, Mari&...