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CODES
2010
IEEE
13 years 2 months ago
Automatic memory partitioning: increasing memory parallelism via data structure partitioning
In high-level synthesis, pipelined designs are often restricted by the number of memory banks available to the synthesis system. Using multiple memory banks can improve the perfor...
Yosi Ben-Asher, Nadav Rotem
ICS
2009
Tsinghua U.
13 years 9 months ago
A translation system for enabling data mining applications on GPUs
Modern GPUs offer much computing power at a very modest cost. Even though CUDA and other related recent developments are accelerating the use of GPUs for general purpose applicati...
Wenjing Ma, Gagan Agrawal
BMCBI
2010
218views more  BMCBI 2010»
13 years 5 months ago
Fast multi-core based multimodal registration of 2D cross-sections and 3D datasets
Background: Solving bioinformatics tasks often requires extensive computational power. Recent trends in processor architecture combine multiple cores into a single chip to improve...
Michael Scharfe, Rainer Pielot, Falk Schreiber
BMCBI
2010
143views more  BMCBI 2010»
13 years 5 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...