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BMCBI
2010
157views more  BMCBI 2010»
13 years 5 months ago
SeqTrim: a high-throughput pipeline for pre-processing any type of sequence read
Background: High-throughput automated sequencing has enabled an exponential growth rate of sequencing data. This requires increasing sequence quality and reliability in order to a...
Juan Falgueras, Antonio J. Lara, Noé Fern&a...
WWW
2005
ACM
14 years 5 months ago
LSH forest: self-tuning indexes for similarity search
We consider the problem of indexing high-dimensional data for answering (approximate) similarity-search queries. Similarity indexes prove to be important in a wide variety of sett...
Mayank Bawa, Tyson Condie, Prasanna Ganesan
BMCBI
2010
163views more  BMCBI 2010»
13 years 5 months ago
DraGnET: Software for storing, managing and analyzing annotated draft genome sequence data
Background: New "next generation" DNA sequencing technologies offer individual researchers the ability to rapidly generate large amounts of genome sequence data at drama...
Stacy Duncan, Ruchita Sirkanungo, Leslie Miller, G...
ICDE
2006
IEEE
127views Database» more  ICDE 2006»
13 years 11 months ago
Processing Recursive XQuery over XML Streams: The Raindrop Approach
— XML stream applications bring the challenge of efficiently processing queries on sequentially accessible tokenbased data. For efficient processing of queries, we need to ensu...
Mingzhu Wei, Ming Li, Elke A. Rundensteiner, Mural...
BMCBI
2010
112views more  BMCBI 2010»
13 years 5 months ago
PhenoFam-gene set enrichment analysis through protein structural information
Background: With the current technological advances in high-throughput biology, the necessity to develop tools that help to analyse the massive amount of data being generated is e...
Maciej Paszkowski-Rogacz, Mikolaj Slabicki, M. Ter...