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BMCBI
2007
132views more  BMCBI 2007»
13 years 5 months ago
TPRpred: a tool for prediction of TPR-, PPR- and SEL1-like repeats from protein sequences
Background: Solenoid repeat proteins of the Tetratrico Peptide Repeat (TPR) family are involved as scaffolds in a broad range of protein-protein interactions. Several resources ar...
Manjunatha R. Karpenahalli, Andrei N. Lupas, Johan...
BMCBI
2010
98views more  BMCBI 2010»
13 years 5 months ago
An optimized TOPS+ comparison method for enhanced TOPS models
nd: Although methods based on highly abstract descriptions of protein structures, such as VAST and TOPS, can perform very fast protein structure comparison, the results can lack a...
Mallika Veeramalai, David Gilbert, Gabriel Valient...
BMCBI
2010
97views more  BMCBI 2010»
13 years 5 months ago
SeqRate: sequence-based protein folding type classification and rates prediction
Background: Protein folding rate is an important property of a protein. Predicting protein folding rate is useful for understanding protein folding process and guiding protein des...
Guan Ning Lin, Zheng Wang, Dong Xu, Jianlin Cheng
BMCBI
2010
129views more  BMCBI 2010»
13 years 5 months ago
The LabelHash Algorithm for Substructure Matching
Background: There is an increasing number of proteins with known structure but unknown function. Determining their function would have a significant impact on understanding diseas...
Mark Moll, Drew H. Bryant, Lydia E. Kavraki
JNCA
2011
126views more  JNCA 2011»
13 years 22 days ago
Coordinated session-based admission control with statistical learning for multi-tier internet applications
Popular Internet applications deploy a multi-tier architecture, with each tier provisioning a certain functionality to its preceding tier. In this paper, we address the challengin...
Sireesha Muppala, Xiaobo Zhou