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» Petri Net Based Model Validation in Systems Biology
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APN
2004
Springer
13 years 10 months ago
Petri Net Based Model Validation in Systems Biology
This paper describes the thriving application of Petri net theory for model validation of different types of molecular biological sys
Monika Heiner, Ina Koch
BMCBI
2010
126views more  BMCBI 2010»
13 years 4 months ago
Simulation of a Petri net-based Model of the Terpenoid Biosynthesis Pathway
Background: The development and simulation of dynamic models of terpenoid biosynthesis has yielded a systems perspective that provides new insights into how the structure of this ...
Aliah Hazmah Hawari, Zeti-Azura Mohamed-Hussein
BMCBI
2008
121views more  BMCBI 2008»
13 years 4 months ago
Modularization of biochemical networks based on classification of Petri net t-invariants
Background: Structural analysis of biochemical networks is a growing field in bioinformatics and systems biology. The availability of an increasing amount of biological data from ...
Eva Grafahrend-Belau, Falk Schreiber, Monika Heine...
TCS
2011
12 years 11 months ago
An algorithmic framework for network reconstruction
Models of biological systems and phenomena are of high scientific interest and practical relevance, but not always easy to obtain due to their inherent complexity. To gain the re...
Markus Durzinsky, Annegret Wagler, Robert Weismant...
GECCO
2004
Springer
150views Optimization» more  GECCO 2004»
13 years 10 months ago
Systems Biology Modeling in Human Genetics Using Petri Nets and Grammatical Evolution
Understanding the hierarchical relationships among biochemical, metabolic, and physiological systems in the mapping between genotype and phenotype is expected to improve the diagno...
Jason H. Moore, Lance W. Hahn