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» Porting Autodock to CUDA
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CEC
2010
IEEE
13 years 6 months ago
Porting Autodock to CUDA
Sarnath Kannan, Raghavendra Ganji
SASP
2009
IEEE
222views Hardware» more  SASP 2009»
13 years 11 months ago
A memory optimization technique for software-managed scratchpad memory in GPUs
—With the appearance of massively parallel and inexpensive platforms such as the G80 generation of NVIDIA GPUs, more real-life applications will be designed or ported to these pl...
Maryam Moazeni, Alex A. T. Bui, Majid Sarrafzadeh
CORR
2010
Springer
178views Education» more  CORR 2010»
13 years 4 months ago
Fast Histograms using Adaptive CUDA Streams
Histograms are widely used in medical imaging, network intrusion detection, packet analysis and other streambased high throughput applications. However, while porting such software...
Sisir Koppaka, Dheevatsa Mudigere, Srihari Narasim...
IPPS
2009
IEEE
13 years 11 months ago
Evaluating the use of GPUs in liver image segmentation and HMMER database searches
In this paper we present the results of parallelizing two life sciences applications, Markov random fieldsbased (MRF) liver segmentation and HMMER’s Viterbi algorithm, using GP...
John Paul Walters, Vidyananth Balu, Suryaprakash K...
CSE
2012
IEEE
12 years 16 days ago
Accelerating Quantum Monte Carlo Simulations of Real Materials on GPU Clusters
—Continuum quantum Monte Carlo (QMC) has proved to be an invaluable tool for predicting the properties of matter from fundamental principles. By solving the manybody Schr¨odinge...
Kenneth Esler, Jeongnim Kim, David M. Ceperley, Lu...