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BMCBI
2011
13 years 14 days ago
The PathOlogist: An Automated Tool for Pathway-Centric Analysis
Background: The PathOlogist is a new tool designed to transform large sets of gene expression data into quantitative descriptors of pathway-level behavior. The tool aims to provid...
Sharon I. Greenblum, Sol Efroni, Carl F. Schaefer,...
PLDI
2011
ACM
12 years 8 months ago
Automatic compilation of MATLAB programs for synergistic execution on heterogeneous processors
MATLAB is an array language, initially popular for rapid prototyping, but is now being increasingly used to develop production code for numerical and scientific applications. Typ...
Ashwin Prasad, Jayvant Anantpur, R. Govindarajan
ICDE
2012
IEEE
238views Database» more  ICDE 2012»
11 years 8 months ago
Mining Knowledge from Data: An Information Network Analysis Approach
Abstract—Most objects and data in the real world are interconnected, forming complex, heterogeneous but often semistructured information networks. However, many database research...
Jiawei Han, Yizhou Sun, Xifeng Yan, Philip S. Yu
KDD
2012
ACM
205views Data Mining» more  KDD 2012»
11 years 8 months ago
Searching and mining trillions of time series subsequences under dynamic time warping
Most time series data mining algorithms use similarity search as a core subroutine, and thus the time taken for similarity search is the bottleneck for virtually all time series d...
Thanawin Rakthanmanon, Bilson J. L. Campana, Abdul...
EDBT
2012
ACM
214views Database» more  EDBT 2012»
11 years 8 months ago
An optimization framework for map-reduce queries
We present an effective optimization framework for general SQLlike map-reduce queries, which is based on a novel query algebra and uses a small number of higher-order physical ope...
Leonidas Fegaras, Chengkai Li, Upa Gupta