22 search results - page 1 / 5 » Probalign: multiple sequence alignment using partition funct... |
BIOINFORMATICS
2006
13 years 4 months ago
2006
BMCBI
2008
13 years 4 months ago
2008
Background: Identification of RNA homologs within genomic stretches is difficult when pairwise sequence identity is low or unalignable flanking residues are present. In both cases...
NAR
2010
12 years 11 months ago
2010
Alignment-based programs are valuable tools for finding potential homologs in genome sequences. Previously, it has been shown that partition function posterior probabilities attun...
BMCBI
2007
13 years 4 months ago
2007
Background: Profile Hidden Markov Models (HMM) are statistical representations of protein families derived from patterns of sequence conservation in multiple alignments and have b...
ICASSP
2007
IEEE
13 years 11 months ago
2007
IEEE
We propose an iterative probabilistic algorithm for estimation of RNA secondary structure using sequence data from two homologous sequences. The method is intended to exploit inte...