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» Programming in Biomolecular Computation
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ENTCS
2006
155views more  ENTCS 2006»
13 years 5 months ago
Biomolecular Agents as Multi-behavioural Concurrent Objects
In recent years, there has been increasing interest in computational models of biological systems based on various calculi of communicating processes, such as the stochastic pi-ca...
Denys Duchier, Céline Kuttler
IPPS
2008
IEEE
13 years 11 months ago
Overcoming scaling challenges in biomolecular simulations across multiple platforms
NAMD† is a portable parallel application for biomolecular simulations. NAMD pioneered the use of hybrid spatial and force decomposition, a technique now used by most scalable pr...
Abhinav Bhatele, Sameer Kumar, Chao Mei, James C. ...
ICAI
2007
13 years 6 months ago
Mining and Dynamic Simulation of Sub-Networks from Large Biomolecular Networks
Biomolecular networks dynamically respond to stimuli and implement cellular function. Understanding these dynamic changes is the key challenge for cell biologists. As biomolecular...
Xiaohua Hu, Fang-Xiang Wu, Michael K. Ng, Bahrad A...
BMCBI
2007
114views more  BMCBI 2007»
13 years 5 months ago
Mining and state-space modeling and verification of sub-networks from large-scale biomolecular networks
Background: Biomolecular networks dynamically respond to stimuli and implement cellular function. Understanding these dynamic changes is the key challenge for cell biologists. As ...
Xiaohua Hu, Fang-Xiang Wu
ICARIS
2005
Springer
13 years 10 months ago
Biomolecular Immune-Computer: Theoretical Basis and Experimental Simulator
We propose to develop a theoretical basis and experimental simulator of the first Immune-Computer (IC) as a new kind of biomolecular computer. This IC will be able to control a fra...
Larisa B. Goncharova, Yannick Jacques, Carlos Mart...