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» Projections for fast protein structure retrieval
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BMCBI
2007
124views more  BMCBI 2007»
13 years 4 months ago
Protein structural similarity search by Ramachandran codes
Background: Protein structural data has increased exponentially, such that fast and accurate tools are necessary to access structure similarity search. To improve the search speed...
Wei-Cheng Lo, Po-Jung Huang, Chih-Hung Chang, Ping...
BMCBI
2004
127views more  BMCBI 2004»
13 years 4 months ago
MolTalk - a programming library for protein structures and structure analysis
Background: Two of the mostly unsolved but increasingly urgent problems for modern biologists are a) to quickly and easily analyse protein structures and b) to comprehensively min...
Alexander V. Diemand, Holger Scheib
CIKM
2006
Springer
13 years 8 months ago
Structure-based querying of proteins using wavelets
The ability to retrieve molecules based on structural similarity has use in many applications, from disease diagnosis and treatment to drug discovery and design. In this paper, we...
Keith Marsolo, Srinivasan Parthasarathy, Kotagiri ...
NLDB
2005
Springer
13 years 10 months ago
Combining Biological Databases and Text Mining to Support New Bioinformatics Applications
Abstract. A large amount of biological knowledge today is only available from full-text research papers. Since neither manual database curators nor users can keep up with the rapid...
René Witte, Christopher J. O. Baker
ICDE
2004
IEEE
139views Database» more  ICDE 2004»
14 years 6 months ago
Engineering a Fast Online Persistent Suffix Tree Construction
Online persistent suffix tree construction has been considered impractical due to its excessive I/O costs. However, these prior studies have not taken into account the effects of ...
Srikanta J. Bedathur, Jayant R. Haritsa