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» Promoter Prediction Using Physico-Chemical Properties of DNA
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COMPLIFE
2006
Springer
13 years 8 months ago
Promoter Prediction Using Physico-Chemical Properties of DNA
The ability to locate promoters within a section of DNA is known to be a very difficult and very important task in DNA analysis. We document an approach that incorporates the conce...
Philip Uren, R. Mike Cameron-Jones, Arthur H. J. S...
BMCBI
2006
108views more  BMCBI 2006»
13 years 4 months ago
Promoter prediction and annotation of microbial genomes based on DNA sequence and structural responses to superhelical stress
Background: In our previous studies, we found that the sites in prokaryotic genomes which are most susceptible to duplex destabilization under the negative superhelical stresses t...
Huiquan Wang, Craig J. Benham
IAJIT
2010
191views more  IAJIT 2010»
13 years 3 months ago
Identification of Promoter Region in Genomic DNA Using Cellular Automata Based Text Clustering
: Identifying the promoter regions play a vital role in understanding human genes. This paper presents a new cellular automata based text clustering algorithm for identifying these...
Kiran Sree, Ramesh Babu
BMCBI
2010
121views more  BMCBI 2010»
13 years 2 months ago
Computing DNA duplex instability profiles efficiently with a two-state model: trends of promoters and binding sites
Background: DNA instability profiles have been used recently for predicting the transcriptional start site and the location of core promoters, and to gain insight into promoter ac...
Miriam R. Kantorovitz, Zoi Rapti, Vladimir Gelev, ...
BMCBI
2005
82views more  BMCBI 2005»
13 years 4 months ago
A novel method for prokaryotic promoter prediction based on DNA stability
Background: In the post-genomic era, correct gene prediction has become one of the biggest challenges in genome annotation. Improved promoter prediction methods can be one step to...
Aditi Kanhere, Manju Bansal