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IJDMB
2006
86views more  IJDMB 2006»
13 years 5 months ago
Improving domain-based protein interaction prediction using biologically-significant negative dataset
: We propose a domain-based classification method to predict protein-protein interactions using probabilities of putative interacting domain pairs derived from both experimentally-...
Xiaoli Li, Soon-Heng Tan, See-Kiong Ng
BMCBI
2010
142views more  BMCBI 2010»
13 years 5 months ago
Discover Protein Complexes in Protein-Protein Interaction Networks Using Parametric Local Modularity
Background: Recent advances in proteomic technologies have enabled us to create detailed protein-protein interaction maps in multiple species and in both normal and diseased cells...
Jongkwang Kim, Kai Tan
BIBE
2007
IEEE
142views Bioinformatics» more  BIBE 2007»
13 years 11 months ago
An HV-SVM Classifier to Infer TF-TF Interactions Using Protein Domains and GO Annotations
—Interactions between transcription factors (TFs) are necessary for deciphering the complex mechanisms of transcription regulation in eukaryotes. In this paper, we proposed a nov...
Xiaoli Li, Jun-Xiang Lee, Bharadwaj Veeravalli, Se...
EVOW
2008
Springer
13 years 7 months ago
Protein Interaction Inference Using Particle Swarm Optimization Algorithm
Many processes in the cell involve interaction among the proteins and determination of the networks of such interactions is of immense importance towards the complete understanding...
Mudassar Iqbal, Alex Alves Freitas, Colin G. Johns...