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» Protein Sequence Pattern Mining with Constraints
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ICDE
2008
IEEE
214views Database» more  ICDE 2008»
14 years 7 months ago
Efficient Online Subsequence Searching in Data Streams under Dynamic Time Warping Distance
Abstract- Data streams of real numbers are generated naturally in many applications. The technology of online subsequence searching in data streams becomes more and more important ...
Mi Zhou, Man Hon Wong
BMCBI
2006
133views more  BMCBI 2006»
13 years 5 months ago
Choosing negative examples for the prediction of protein-protein interactions
The protein-protein interaction networks of even well-studied model organisms are sketchy at best, highlighting the continued need for computational methods to help direct experim...
Asa Ben-Hur, William Stafford Noble
BMCBI
2008
130views more  BMCBI 2008»
13 years 5 months ago
IDEA: Interactive Display for Evolutionary Analyses
Background: The availability of complete genomic sequences for hundreds of organisms promises to make obtaining genome-wide estimates of substitution rates, selective constraints ...
Amy Egan, Anup Mahurkar, Jonathan Crabtree, Jonath...
BMCBI
2008
90views more  BMCBI 2008»
13 years 5 months ago
Genome-scale study of the importance of binding site context for transcription factor binding and gene regulation
Background: The rate of mRNA transcription is controlled by transcription factors that bind to specific DNA motifs in promoter regions upstream of protein coding genes. Recent res...
Jakub Orzechowski Westholm, Feifei Xu, Hans Ronne,...
SSD
2001
Springer
122views Database» more  SSD 2001»
13 years 10 months ago
Calendars, Time Granularities, and Automata
The notion of time granularity comes into play in a variety of problems involving time representation and management in database applications, including temporal database design, t...
Ugo Dal Lago, Angelo Montanari