67 search results - page 3 / 14 » Protein Sequence Pattern Mining with Constraints |
KDD
2008
ACM
14 years 6 months ago
2008
ACM
Pattern discovery in sequences is an important problem in many applications, especially in computational biology and text mining. However, due to the noisy nature of data, the tra...
BMCBI
2007
13 years 6 months ago
2007
Background: False occurrences of functional motifs in protein sequences can be considered as random events due solely to the sequence composition of a proteome. Here we use a nume...
IDEAS
2007
IEEE
14 years 17 days ago
2007
IEEE
The transversal hypergraph enumeration based algorithms can be efficient in mining frequent itemsets, however it is difficult to apply them to sequence mining problems. In this ...
EDBT
2009
ACM
13 years 10 months ago
2009
ACM
The classic Generalized Sequential Patterns (GSP) algorithm returns all frequent sequences present in a database. However, usually a few ones are interesting from a user's po...
FLAIRS
2008
13 years 8 months ago
2008
1 In this paper, we propose a peptide folding prediction method which discovers contrast patterns to differentiate and predict peptide folding classes. A contrast pattern is defin...