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» Protein structure alignment using elastic shape analysis
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BMCBI
2005
100views more  BMCBI 2005»
13 years 5 months ago
Evolutionary models for insertions and deletions in a probabilistic modeling framework
Background: Probabilistic models for sequence comparison (such as hidden Markov models and pair hidden Markov models for proteins and mRNAs, or their context-free grammar counterp...
Elena Rivas
CIVR
2009
Springer
212views Image Analysis» more  CIVR 2009»
14 years 5 days ago
Video copy detection by fast sequence matching
Sequence matching techniques are effective for comparing two videos. However, existing approaches suffer from demanding computational costs and thus are not scalable for large-sca...
Mei-Chen Yeh, Kwang-Ting Cheng
COMPGEOM
2006
ACM
13 years 11 months ago
Vines and vineyards by updating persistence in linear time
Persistent homology is the mathematical core of recent work on shape, including reconstruction, recognition, and matching. Its pertinent information is encapsulated by a pairing o...
David Cohen-Steiner, Herbert Edelsbrunner, Dmitriy...
BMCBI
2010
110views more  BMCBI 2010»
13 years 5 months ago
GenHtr: a tool for comparative assessment of genetic heterogeneity in microbial genomes generated by massive short-read sequenci
Background: Microevolution is the study of short-term changes of alleles within a population and their effects on the phenotype of organisms. The result of the below-species-level...
GongXin Yu
BMCBI
2010
156views more  BMCBI 2010»
13 years 5 months ago
Extended morphological processing: a practical method for automatic spot detection of biological markers from microscopic images
Background: A reliable extraction technique for resolving multiple spots in light or electron microscopic images is essential in investigations of the spatial distribution and dyn...
Yoshitaka Kimori, Norio Baba, Nobuhiro Morone