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» Quantifying Homology Classes
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CORR
2008
Springer
118views Education» more  CORR 2008»
13 years 4 months ago
Quantifying Homology Classes
We develop a method for measuring homology classes. This involves three problems. First, we define the size of a homology class, using ideas from relative homology. Second, we defi...
Chao Chen, Daniel Freedman
FOCM
2011
107views more  FOCM 2011»
12 years 8 months ago
Quantifying Transversality by Measuring the Robustness of Intersections
By definition, transverse intersections are stable under infinitesimal perturbations. Using persistent homology, we extend this notion to a measure. Given a space of perturbatio...
Herbert Edelsbrunner, Dmitriy Morozov, Amit K. Pat...
BMCBI
2010
95views more  BMCBI 2010»
13 years 4 months ago
Quantifying the relationship between sequence and three-dimensional structure conservation in RNA
Background: In recent years, the number of available RNA structures has rapidly grown reflecting the increased interest on RNA biology. Similarly to the studies carried out two de...
Emidio Capriotti, Marc A. Martí-Renom
CORR
2011
Springer
162views Education» more  CORR 2011»
12 years 8 months ago
Homology and Robustness of Level and Interlevel Sets
Given a function f : X → R on a topological space, we consider the preimages of intervals and their homology groups and show how to read the ranks of these groups from the exten...
Paul Bendich, Herbert Edelsbrunner, Dmitriy Morozo...
ESA
2010
Springer
248views Algorithms» more  ESA 2010»
13 years 5 months ago
The Robustness of Level Sets
We define the robustness of a level set homology class of a function f : X R as the magnitude of a perturbation necessary to kill the class. Casting this notion into a group theor...
Paul Bendich, Herbert Edelsbrunner, Dmitriy Morozo...