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SSDBM
1999
IEEE
135views Database» more  SSDBM 1999»
12 years 6 months ago
Query Processing in the TAMBIS Bioinformatics Source Integration System
Conducting bioinformatic analyses involves biologists in expressing requests over a range of highly heterogeneous information sources and software tools. Such activities are labor...
Norman W. Paton, Robert Stevens, Patricia G. Baker...
BMCBI
2007
176views more  BMCBI 2007»
12 years 2 months ago
The Firegoose: two-way integration of diverse data from different bioinformatics web resources with desktop applications
Background: Information resources on the World Wide Web play an indispensable role in modern biology. But integrating data from multiple sources is often encumbered by the need to...
J. Christopher Bare, Paul T. Shannon, Amy K. Schmi...
IPPS
2008
IEEE
12 years 8 months ago
Supporting high performance bioinformatics flat-file data processing using indices
As an essential part of in vitro analysis, biological database query has become more and more important in the research process. A few challenges that are speciļ¬c to bioinformat...
Xuan Zhang, Gagan Agrawal
ASWC
2009
Springer
11 years 12 months ago
SHARE: A Semantic Web Query Engine for Bioinformatics
Driven by the goal of automating data analyses in the field of bioinformatics, SHARE (Semantic Health and Research Environment) is a specialized SPARQL engine that resolves queries...
Benjamin P. Vandervalk, E. Luke McCarthy, Mark D. ...
BMCBI
2005
292views more  BMCBI 2005»
12 years 1 months ago
Atlas - a data warehouse for integrative bioinformatics
Background: We present a biological data warehouse called Atlas that locally stores and integrates biological sequences, molecular interactions, homology information, functional a...
Sohrab P. Shah, Yong Huang, Tao Xu, Macaire M. S. ...
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