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BMCBI
2010
148views more  BMCBI 2010»
13 years 5 months ago
Structuring heterogeneous biological information using fuzzy clustering of k-partite graphs
Background: Extensive and automated data integration in bioinformatics facilitates the construction of large, complex biological networks. However, the challenge lies in the inter...
Mara L. Hartsperger, Florian Blöchl, Volker S...
BMCBI
2007
160views more  BMCBI 2007»
13 years 5 months ago
Identifying protein complexes directly from high-throughput TAP data with Markov random fields
Background: Predicting protein complexes from experimental data remains a challenge due to limited resolution and stochastic errors of high-throughput methods. Current algorithms ...
Wasinee Rungsarityotin, Roland Krause, Arno Sch&ou...
BMCBI
2008
150views more  BMCBI 2008»
13 years 5 months ago
Natural Language Processing in aid of FlyBase curators
Background: Despite increasing interest in applying Natural Language Processing (NLP) to biomedical text, whether this technology can facilitate tasks such as database curation re...
Nikiforos Karamanis, Ruth Seal, Ian Lewin, Peter M...
IPM
2007
105views more  IPM 2007»
13 years 4 months ago
Schema and constraints-based matching and merging of Topic Maps
In this paper, we propose a multi-strategic matching and merging approach to find correspondences between ontologies based on the syntactic or semantic characteristics and constr...
Jung-Min Kim, Hyopil Shin, Hyoung-Joo Kim
CORR
2010
Springer
139views Education» more  CORR 2010»
12 years 12 months ago
Data Cleaning and Query Answering with Matching Dependencies and Matching Functions
Matching dependencies were recently introduced as declarative rules for data cleaning and entity resolution. Enforcing a matching dependency on a database instance identifies the ...
Leopoldo E. Bertossi, Solmaz Kolahi, Laks V. S. La...