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» Querying the public databases for sequences using complex ke...
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PODS
2010
ACM
213views Database» more  PODS 2010»
13 years 10 months ago
Expressive languages for path queries over graph-structured data
For many problems arising in the setting of graph querying (such as finding semantic associations in RDF graphs, exact and approximate pattern matching, sequence alignment, etc.)...
Pablo Barceló, Carlos A. Hurtado, Leonid Li...
NAR
1998
229views more  NAR 1998»
13 years 4 months ago
GDB: the Human Genome Database
The Genome Database (GDB, http://www.gdb.org ) is a public repository of data on human genes, clones, STSs, polymorphisms and maps. GDB entries are highly cross-linked to each oth...
Stanley Letovsky, Robert W. Cottingham, Christophe...
BMCBI
2006
128views more  BMCBI 2006»
13 years 5 months ago
Construction of a nasopharyngeal carcinoma 2D/MS repository with Open Source XML Database - Xindice
Background: Many proteomics initiatives require integration of all information with uniformcriteria from collection of samples and data display to publication of experimental resu...
Feng Li, Maoyu Li, Zhiqiang Xiao, Pengfei Zhang, J...
EDBT
2009
ACM
277views Database» more  EDBT 2009»
13 years 10 months ago
G-hash: towards fast kernel-based similarity search in large graph databases
Structured data including sets, sequences, trees and graphs, pose significant challenges to fundamental aspects of data management such as efficient storage, indexing, and simila...
Xiaohong Wang, Aaron M. Smalter, Jun Huan, Gerald ...
BMCBI
2005
159views more  BMCBI 2005»
13 years 5 months ago
Columba: an integrated database of proteins, structures, and annotations
Background: Structural and functional research often requires the computation of sets of protein structures based on certain properties of the proteins, such as sequence features,...
Silke Trißl, Kristian Rother, Heiko Mül...