48 search results - page 9 / 10 » RNA Sampler: a new sampling based algorithm for common RNA s... |
CORR
2006
Springer
13 years 5 months ago
2006
Springer
An RNA molecule is structured on several layers. The primary and most obvious structure is its sequence of bases, i.e. a word over the alphabet {A, C, G, U}. The higher structure i...
TCBB
2010
13 years 3 months ago
2010
— We describe a theoretical unifying framework to express comparison of RNA structures, which we call alignment hierarchy. This framework relies on the definition of common supe...
BMCBI
2008
13 years 5 months ago
2008
Background: Most non-coding RNA families exert their function by means of a conserved, common secondary structure. The Rfam data base contains more than five hundred structurally ...
BMCBI
2005
13 years 5 months ago
2005
Background: Accurate and automatic gene finding and structural prediction is a common problem in bioinformatics, and applications need to be capable of handling non-canonical spli...
TCBB
2010
13 years 3 months ago
2010
— We present efficient cache-oblivious algorithms for some well-studied string problems in bioinformatics including the longest common subsequence, global pairwise sequence alig...