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BMCBI
2008
149views more  BMCBI 2008»
13 years 5 months ago
Clustering of cognate proteins among distinct proteomes derived from multiple links to a single seed sequence
Background: Modern proteomes evolved by modification of pre-existing ones. It is extremely important to comparative biology that related proteins be identified as members of the s...
Adriano Barbosa-Silva, Venkata P. Satagopam, Reinh...
BMCBI
2007
265views more  BMCBI 2007»
13 years 5 months ago
Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing
Background: Detecting groups of functionally related proteins from their amino acid sequence alone has been a long-standing challenge in computational genome research. Several clu...
Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, S...
BMCBI
2010
121views more  BMCBI 2010»
13 years 2 months ago
A grammar-based distance metric enables fast and accurate clustering of large sets of 16S sequences
Background: We propose a sequence clustering algorithm and compare the partition quality and execution time of the proposed algorithm with those of a popular existing algorithm. T...
David J. Russell, Samuel F. Way, Andrew K. Benson,...
MSV
2004
13 years 6 months ago
MABAC - Matrix Based Clustering Algorithm
Clustering is a prominent method in the data mining field. It is a discovery process that groups data such that intra cluster similarity is maximized and the inter cluster similar...
Yonghui Chen, Alan P. Sprague, Kevin D. Reilly
CCGRID
2003
IEEE
13 years 10 months ago
An Agent Version of a Cluster Server
Agent-oriented software is promising improvements especially for the design of distributed systems. But currently, there is a substantial gap between the massive number of publica...
Andraz Bezek, Matjaz Gams