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» Relationally Periodic Sequences and Subword Complexity
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DLT
2008
13 years 6 months ago
Relationally Periodic Sequences and Subword Complexity
By the famous theorem of Morse and Hedlund, a word is ultimately periodic if and only if it has bounded subword complexity, i.e., for sufficiently large n, the number of factors of...
Julien Cassaigne, Tomi Kärki, Luca Q. Zamboni
BMCBI
2010
121views more  BMCBI 2010»
13 years 5 months ago
MS4 - Multi-Scale Selector of Sequence Signatures: An alignment-free method for classification of biological sequences
Background: While multiple alignment is the first step of usual classification schemes for biological sequences, alignment-free methods are being increasingly used as alternatives...
Eduardo Corel, Florian Pitschi, Ivan Laprevotte, G...
INFORMATICALT
2010
142views more  INFORMATICALT 2010»
13 years 3 months ago
Complexity Estimation of Genetic Sequences Using Information-Theoretic and Frequency Analysis Methods
The genetic information in cells is stored in DNA sequences, represented by a string of four letters, each corresponding to a definite type of nucleotides. Genomic DNA sequences a...
Robertas Damasevicius
SIGMOD
2005
ACM
144views Database» more  SIGMOD 2005»
14 years 5 months ago
Mining Periodic Patterns with Gap Requirement from Sequences
We study a problem of mining frequently occurring periodic patterns with a gap requirement from sequences. Given a character sequence S of length L and a pattern P of length l, we...
Minghua Zhang, Ben Kao, David Wai-Lok Cheung, Kevi...
INTERSPEECH
2010
13 years 3 days ago
Similarity scoring for recognizing repeated out-of-vocabulary words
We develop a similarity measure to detect repeatedly occurring Out-of-Vocabulary words (OOV), since these carry important information. Sub-word sequences in the recognition output...
Mirko Hannemann, Stefan Kombrink, Martin Karafi&aa...