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BMCBI
2007
202views more  BMCBI 2007»
13 years 4 months ago
ProtNet: a tool for stochastic simulations of protein interaction networks dynamics
Background: Protein interactions support cell organization and mediate its response to any specific stimulus. Recent technological advances have produced large data-sets that aim ...
Massimo Bernaschi, Filippo Castiglione, Alessandra...
ASMTA
2008
Springer
167views Mathematics» more  ASMTA 2008»
13 years 6 months ago
Perfect Simulation of Stochastic Automata Networks
The solution of continuous and discrete-time Markovian models is still challenging mainly when we model large complex systems, for example, to obtain performance indexes of paralle...
Paulo Fernandes, Jean-Marc Vincent, Thais Webber
BMCBI
2010
259views more  BMCBI 2010»
12 years 12 months ago
Rule-based spatial modeling with diffusing, geometrically constrained molecules
Background: We suggest a new type of modeling approach for the coarse grained, particle-based spatial simulation of combinatorially complex chemical reaction systems. In our appro...
Gerd Gruenert, Bashar Ibrahim, Thorsten Lenser, Ma...
JUCS
2010
215views more  JUCS 2010»
12 years 11 months ago
A Multidisciplinary Survey of Computational Techniques for the Modelling, Simulation and Analysis of Biochemical Networks
: All processes of life are controlled by networks of interacting biochemical components. The purpose of modelling these networks is manifold. From a theoretical point of view it a...
James Decraene, Thomas Hinze
CVIU
2007
108views more  CVIU 2007»
13 years 4 months ago
A real-time hand tracker using variable-length Markov models of behaviour
We present a novel approach for visual tracking of structured behaviour as observed in human–computer interaction. An automatically acquired variable-length Markov model is used...
Nikolay Stefanov, Aphrodite Galata, Roger J. Hubbo...