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» Representing and Querying Data Transformations
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BMCBI
2005
169views more  BMCBI 2005»
13 years 5 months ago
MAPPER: a search engine for the computational identification of putative transcription factor binding sites in multiple genomes
Background: Cis-regulatory modules are combinations of regulatory elements occurring in close proximity to each other that control the spatial and temporal expression of genes. Th...
Voichita D. Marinescu, Isaac S. Kohane, Alberto Ri...
JIB
2007
124views more  JIB 2007»
13 years 5 months ago
Analysis of integrated biomolecular networks using a generic network analysis suite
The informative value of biomolecular networks has shifted from being solely information resources for possible cellular partners (whether these embody proteins, (ribo)nucleic aci...
Matthias Oesterheld, Hans-Werner Mewes, Volker St&...
PVLDB
2008
124views more  PVLDB 2008»
13 years 4 months ago
Google's Deep Web crawl
The Deep Web, i.e., content hidden behind HTML forms, has long been acknowledged as a significant gap in search engine coverage. Since it represents a large portion of the structu...
Jayant Madhavan, David Ko, Lucja Kot, Vignesh Gana...
BMCBI
2011
13 years 11 days ago
Logical Development of the Cell Ontology
Background: The Cell Ontology (CL) is an ontology for the representation of in vivo cell types. As biological ontologies such as the CL grow in complexity, they become increasingl...
Terrence F. Meehan, Anna Maria Masci, Amina Abdull...
TVCG
2010
198views more  TVCG 2010»
13 years 1 days ago
Isodiamond Hierarchies: An Efficient Multiresolution Representation for Isosurfaces and Interval Volumes
Efficient multiresolution representations for isosurfaces and interval volumes are becoming increasingly important as the gap between volume data sizes and processing speed continu...
Kenneth Weiss, Leila De Floriani