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» Robust Topology Representing Networks
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BMCBI
2007
90views more  BMCBI 2007»
13 years 5 months ago
Gene network interconnectedness and the generalized topological overlap measure
Background: Network methods are increasingly used to represent the interactions of genes and/ or proteins. Genes or proteins that are directly linked may have a similar biological...
Andy M. Yip, Steve Horvath
JAIR
2002
120views more  JAIR 2002»
13 years 5 months ago
Learning Geometrically-Constrained Hidden Markov Models for Robot Navigation: Bridging the Topological-Geometrical Gap
Hidden Markov models hmms and partially observable Markov decision processes pomdps provide useful tools for modeling dynamical systems. They are particularly useful for represent...
Hagit Shatkay, Leslie Pack Kaelbling
BMCBI
2006
133views more  BMCBI 2006»
13 years 5 months ago
Topological basis of signal integration in the transcriptional-regulatory network of the yeast, Saccharomyces cerevisiae
Background: Signal recognition and information processing is a fundamental cellular function, which in part involves comprehensive transcriptional regulatory (TR) mechanisms carri...
Illés J. Farkas, Chuang Wu, Chakra Chennubh...
BMCBI
2008
131views more  BMCBI 2008»
13 years 5 months ago
Modifying the DPClus algorithm for identifying protein complexes based on new topological structures
Background: Identification of protein complexes is crucial for understanding principles of cellular organization and functions. As the size of protein-protein interaction set incr...
Min Li, Jianer Chen, Jianxin Wang, Bin Hu, Gang Ch...
RIVF
2008
13 years 6 months ago
Robust overlay network with Self-Adaptive topology: Protocol description
We introduce a new overlay network named ROSA1 . Overlay networks offer a way to bypass the routing constraints of the underlying network. ROSA used this overlay network property t...
Loic Baud, Nguyen Pham, Patrick Bellot