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» Rule-Based Modelling of Cellular Signalling
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CONCUR
2007
Springer
13 years 10 months ago
Rule-Based Modelling of Cellular Signalling
Abstract. Modelling is becoming a necessity in studying biological signalling pathways, because the combinatorial complexity of such systems rapidly overwhelms intuitive and qualit...
Vincent Danos, Jérôme Feret, Walter F...
BIBE
2007
IEEE
149views Bioinformatics» more  BIBE 2007»
13 years 8 months ago
XML Encoding of Features Describing Rule-Based Modeling of Reaction Networks with Multi-Component Molecular Complexes
Multi-state molecules and multi-component complexes are commonly involved in cellular signaling. Accounting for molecules that have multiple potential states, such as a protein tha...
Michael L. Blinov, Ion I. Moraru
FMSB
2008
129views Formal Methods» more  FMSB 2008»
13 years 5 months ago
Rule-Based Modelling, Symmetries, Refinements
Rule-based modelling is particularly effective for handling the highly combinatorial aspects of cellular signalling. The dynamics is described in terms of interactions between part...
Vincent Danos, Jérôme Feret, Walter F...
LICS
2010
IEEE
13 years 2 months ago
Abstracting the Differential Semantics of Rule-Based Models: Exact and Automated Model Reduction
ing the differential semantics of rule-based models: exact and automated model reduction (Invited Lecture) Vincent Danos∗§, J´erˆome Feret†, Walter Fontana‡, Russell Harme...
Vincent Danos, Jérôme Feret, Walter F...
TSD
2005
Springer
13 years 9 months ago
Robust Rule-Based Method for Automatic Break Assignment in Russian Texts
In this paper a new rule-based approach to break assignment for the Russian language is discussed. It is a flexible and robust method of segmentation of texts in Russian in prosod...
Ilya Oparin