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    » SEGS: Search for enriched gene sets in microarray data
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    BMCBI
    2008
    173views more  BMCBI 2008»
    Gene Vector Analysis (Geneva): A unified method to detect differentially-regulated gene sets and similar microarray experiments
    13 years 5 months ago
    Gene Vector Analysis (Geneva): A unified method to detect differentially-regulated gene sets and similar microarray experiments
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    Background: Microarray experiments measure changes in the expression of thousands of genes. The resulting lists of genes with changes in expression are then searched for biologica...
    Stephen W. Tanner, Pankaj Agarwal
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    BIOINFORMATICS
    2008
    122views more  BIOINFORMATICS 2008»
    Supervised principal component analysis for gene set enrichment of microarray data with continuous or survival outcomes
    13 years 5 months ago
    Supervised principal component analysis for gene set enrichment of microarray data with continuous or survival outcomes
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    Xi Chen, Lily Wang, Jonathan D. Smith, Bing Zhang
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    BMCBI
    2007
    148views more  BMCBI 2007»
    Computation of significance scores of unweighted Gene Set Enrichment Analyses
    13 years 5 months ago
    Computation of significance scores of unweighted Gene Set Enrichment Analyses
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    Background: Gene Set Enrichment Analysis (GSEA) is a computational method for the statistical evaluation of sorted lists of genes or proteins. Originally GSEA was developed for in...
    Andreas Keller, Christina Backes, Hans-Peter Lenho...
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    BMCBI
    2010
    167views more  BMCBI 2010»
    Bi-directional gene set enrichment and canonical correlation analysis identify key diet-sensitive pathways and biomarkers of met
    13 years 5 months ago
    Bi-directional gene set enrichment and canonical correlation analysis identify key diet-sensitive pathways and biomarkers of met
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    Background: Currently, a number of bioinformatics methods are available to generate appropriate lists of genes from a microarray experiment. While these lists represent an accurat...
    Melissa J. Morine, Jolene McMonagle, Sinead Toomey...
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    BMCBI
    2005
    153views more  BMCBI 2005»
    Mining published lists of cancer related microarray experiments: Identification of a gene expression signature having a critical
    13 years 5 months ago
    Mining published lists of cancer related microarray experiments: Identification of a gene expression signature having a critical
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    Background: Routine application of gene expression microarray technology is rapidly producing large amounts of data that necessitate new approaches of analysis. The analysis of a ...
    Giacomo Finocchiaro, Francesco Mancuso, Heiko M&uu...
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