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» SWAMP: Smith-Waterman using associative massive parallelism
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IPPS
2002
IEEE
13 years 9 months ago
An Associative Static and Dynamic Convex Hull Algorithm
This paper presents a new static and dynamic recursive parallel algorithm for the convex hull problem. This algorithm is a parallel adaptation of the Graham Scan and Quick Hull al...
Maher M. Atwah, Johnnie W. Baker
IPPS
2007
IEEE
13 years 11 months ago
A Prototype Multithreaded Associative SIMD Processor
The performance of SIMD processors is often limited by the time it takes to transfer data between the centralized control unit and the parallel processor array. This is especially...
Kevin Schaffer, Robert A. Walker
ICDCSW
2005
IEEE
13 years 10 months ago
An Extended Directional MAC for Location Information Staleness in Ad Hoc Networks
Recently, several directional MAC protocols using smart antennas or directional antennas have been proposed for wireless ad hoc networks including our proposed MAC protocol called...
Masanori Takata, Masaki Bandai, Takashi Watanabe
ICS
2010
Tsinghua U.
13 years 7 months ago
Clustering performance data efficiently at massive scales
Existing supercomputers have hundreds of thousands of processor cores, and future systems may have hundreds of millions. Developers need detailed performance measurements to tune ...
Todd Gamblin, Bronis R. de Supinski, Martin Schulz...
BMCBI
2010
134views more  BMCBI 2010»
13 years 5 months ago
R-Gada: a fast and flexible pipeline for copy number analysis in association studies
Background: Genome-wide association studies (GWAS) using Copy Number Variation (CNV) are becoming a central focus of genetic research. CNVs have successfully provided target genom...
Roger Pique-Regi, Alejandro Cáceres, Juan R...