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BMCBI
2011
12 years 8 months ago
Dissecting protein loops with a statistical scalpel suggests a functional implication of some structural motifs
Background: One of the strategies for protein function annotation is to search particular structural motifs that are known to be shared by proteins with a given function. Results:...
Leslie Regad, Juliette Martin, Anne-Claude Camprou...
JCC
2011
154views more  JCC 2011»
12 years 7 months ago
Can we trust docking results? Evaluation of seven commonly used programs on PDBbind database
: Docking is one of the most commonly used techniques in drug design. It is used for both identifying correct poses of a ligand in the binding site of a protein as well as for the ...
Dariusz Plewczynski, Michal Lazniewski, Rafal Augu...
KDD
2009
ACM
204views Data Mining» more  KDD 2009»
14 years 5 months ago
Improving classification accuracy using automatically extracted training data
Classification is a core task in knowledge discovery and data mining, and there has been substantial research effort in developing sophisticated classification models. In a parall...
Ariel Fuxman, Anitha Kannan, Andrew B. Goldberg, R...
FUN
2010
Springer
312views Algorithms» more  FUN 2010»
13 years 9 months ago
On Table Arrangements, Scrabble Freaks, and Jumbled Pattern Matching
Given a string s, the Parikh vector of s, denoted p(s), counts the multiplicity of each character in s. Searching for a match of Parikh vector q (a “jumbled string”) in the tex...
Peter Burcsi, Ferdinando Cicalese, Gabriele Fici, ...
SIAMCOMP
2002
138views more  SIAMCOMP 2002»
13 years 4 months ago
Phase Change of Limit Laws in the Quicksort Recurrence under Varying Toll Functions
We characterize all limit laws of the quicksort type random variables defined recursively by Xn d = XIn + X n-1-In + Tn when the "toll function" Tn varies and satisfies ...
Hsien-Kuei Hwang, Ralph Neininger