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» Sequence Comparisons via Algorithmic Mutual Information
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BMCBI
2010
121views more  BMCBI 2010»
13 years 5 months ago
Knowledge-based annotation of small molecule binding sites in proteins
Background: The study of protein-small molecule interactions is vital for understanding protein function and for practical applications in drug discovery. To benefit from the rapi...
Ratna R. Thangudu, Manoj Tyagi, Benjamin A. Shoema...
IEEEPACT
2009
IEEE
14 years 13 days ago
Soft-OLP: Improving Hardware Cache Performance through Software-Controlled Object-Level Partitioning
—Performance degradation of memory-intensive programs caused by the LRU policy’s inability to handle weaklocality data accesses in the last level cache is increasingly serious ...
Qingda Lu, Jiang Lin, Xiaoning Ding, Zhao Zhang, X...
DLOG
2010
13 years 3 months ago
Optimizing Algebraic Tableau Reasoning for SHOQ: First Experimental Results
In this paper we outline an algebraic tableau algorithm for the DL SHOQ, which supports more informed reasoning due to the use of semantic partitioning and integer programming. We ...
Jocelyne Faddoul, Volker Haarslev
VIS
2005
IEEE
146views Visualization» more  VIS 2005»
14 years 7 months ago
View Selection for Volume Rendering
In a visualization of a three-dimensional dataset, the insights gained are dependent on what is occluded and what is not. Suggestion of interesting viewpoints can improve both the...
Udeepta Bordoloi, Han-Wei Shen
BMCBI
2010
145views more  BMCBI 2010»
13 years 24 days ago
Directionality in protein fold prediction
Background: Ever since the ground-breaking work of Anfinsen et al. in which a denatured protein was found to refold to its native state, it has been frequently stated by the prote...
Jonathan J. Ellis, Fabien P. E. Huard, Charlotte M...