131 search results - page 2 / 27 » Sequence Prediction Based on Monotone Complexity |
CORR
2010
Springer
13 years 3 months ago
2010
Springer
In this paper we prove that the avalanche problem for the Kadanoff sandpile model (KSPM) is P-complete for two-dimensions. Our proof is based on a reduction from the monotone circ...
BMCBI
2011
12 years 9 months ago
2011
Background: Although homology-based methods are among the most widely used methods for predicting the structure and function of proteins, the question as to whether interface sequ...
ICASSP
2007
IEEE
13 years 11 months ago
2007
IEEE
Recently, profile context-sensitive HMMs (profile-csHMMs) have been proposed which are very effective in modeling the common patterns and motifs in related symbol sequences. Pro...
BMCBI
2008
13 years 5 months ago
2008
Background: Prediction of disulfide bridges from protein sequences is useful for characterizing structural and functional properties of proteins. Several methods based on differen...
BMCBI
2004
13 years 5 months ago
2004
Background: In a previous paper, we introduced MUSCLE, a new program for creating multiple alignments of protein sequences, giving a brief summary of the algorithm and showing MUS...