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CLUSTER
2007
IEEE
13 years 11 months ago
Sequential and parallel implementation of a constraint-based algorithm for searching protein structures
— Data mining in biological structure libraries can be a powerful tool to better understand biochemical processes. This article introduces the LISA algorithm which enables the re...
Sascha Hunold, Thomas Rauber, Georg Wille
CP
2006
Springer
13 years 9 months ago
Distributed Constraint-Based Local Search
Distributed computing is increasingly important at a time when the doubling of the number of transistors on a processor every 18 months no longer translates in a doubling of speed ...
Laurent Michel, Andrew See, Pascal Van Hentenryck
BMCBI
2006
166views more  BMCBI 2006»
13 years 5 months ago
SEQOPTICS: a protein sequence clustering system
Background: Protein sequence clustering has been widely used as a part of the analysis of protein structure and function. In most cases single linkage or graph-based clustering al...
Yonghui Chen, Kevin D. Reilly, Alan P. Sprague, Zh...
IPPS
2003
IEEE
13 years 10 months ago
Design and Evaluation of a Parallel HOP Clustering Algorithm for Cosmological Simulation
Clustering, or unsupervised classification, has many uses in fields that depend on grouping results from large amount of data, an example being the N-body cosmological simulation ...
Ying Liu, Wei-keng Liao, Alok N. Choudhary
CCECE
2006
IEEE
13 years 11 months ago
Survey of Biological High Performance Computing: Algorithms, Implementations and Outlook Research
During recent years there has been an explosive growth of biological data coming from genome projects, proteomics, protein structure determination, and the rapid expansion in digi...
Nasreddine Hireche, J. M. Pierre Langlois, Gabriel...