32 search results - page 1 / 7 » Shared Memory Parallelization of the GROMOS96 Molecular Dyna... |
SCI
1999
Springer
13 years 8 months ago
1999
Springer
This paper describes the parallelization of a commercial molecular dynamics simulation code, GROMOS96, on a SCI (Scalable Coherent Interface) interconnected PC cluster. The underly...
JCPHY
2011
12 years 7 months ago
2011
The calculation of radial distribution functions (RDFs) from molecular dynamics trajectory data is a common and computationally expensive analysis task. The rate limiting step in ...
WSC
1998
13 years 5 months ago
1998
We have taken a NIST molecular dynamics simulation program (md3), which was configured as a single sequential process running on a CRAY C90 vector supercomputer, and parallelized ...
IPPS
1997
IEEE
13 years 8 months ago
1997
IEEE
We present the Data Parallel Fortran (DPF) benchmark suite, a set of data parallel Fortran codes forevaluatingdata parallel compilers appropriatefor any target parallel architectu...
IPPS
2008
IEEE
13 years 11 months ago
2008
IEEE
Processing nodes of the Cray XT and IBM Blue Gene Massively Parallel Processing (MPP) systems are composed of multiple execution units, sharing memory and network subsystems. Thes...