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BMCBI
2007
265views more  BMCBI 2007»
13 years 5 months ago
Large scale clustering of protein sequences with FORCE -A layout based heuristic for weighted cluster editing
Background: Detecting groups of functionally related proteins from their amino acid sequence alone has been a long-standing challenge in computational genome research. Several clu...
Tobias Wittkop, Jan Baumbach, Francisco P. Lobo, S...
BMCBI
2007
147views more  BMCBI 2007»
13 years 5 months ago
Improved residue contact prediction using support vector machines and a large feature set
Background: Predicting protein residue-residue contacts is an important 2D prediction task. It is useful for ab initio structure prediction and understanding protein folding. In s...
Jianlin Cheng, Pierre Baldi
RV
2010
Springer
220views Hardware» more  RV 2010»
13 years 3 months ago
Runtime Verification with the RV System
The RV system is the first system to merge the benefits of Runtime Monitoring with Predictive Analysis. The Runtime Monitoring portion of RV is based on the successful Monitoring O...
Patrick O'Neil Meredith, Grigore Rosu
CSCW
2010
ACM
13 years 2 months ago
Infrastructure Time: Long-term Matters in Collaborative Development
This paper addresses the collaborative development of information infrastructure for supporting data-rich scientific collaboration. Studying infrastructure development empirically ...
Helena Karasti, Karen S. Baker, Florence Millerand
BMCBI
2011
12 years 9 months ago
A fast and accurate method to detect allelic genomic imbalances underlying mosaic rearrangements using SNP array data
Background: Mosaicism for copy number and copy neutral chromosomal rearrangements has been recently identified as a relatively common source of genetic variation in the normal pop...
Juan R. González, Benjamin Rodriguez-Santia...