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    BMCBI
    2008
    152views more  BMCBI 2008»
    Predicting biological system objectives de novo from internal state measurements
    13 years 5 months ago
    Predicting biological system objectives de novo from internal state measurements
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    Background: Optimization theory has been applied to complex biological systems to interrogate network properties and develop and refine metabolic engineering strategies. For examp...
    Erwin P. Gianchandani, Matthew A. Oberhardt, Antho...
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    BMCBI
    2008
    153views more  BMCBI 2008»
    Estimating the size of the solution space of metabolic networks
    13 years 5 months ago
    Estimating the size of the solution space of metabolic networks
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    Background: Cellular metabolism is one of the most investigated system of biological interactions. While the topological nature of individual reactions and pathways in the network...
    Alfredo Braunstein, Roberto Mulet, Andrea Pagnani
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    BMCBI
    2008
    142views more  BMCBI 2008»
    Strategies for measuring evolutionary conservation of RNA secondary structures
    13 years 5 months ago
    Strategies for measuring evolutionary conservation of RNA secondary structures
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    Background: Evolutionary conservation of RNA secondary structure is a typical feature of many functional non-coding RNAs. Since almost all of the available methods used for predic...
    Andreas R. Gruber, Stephan H. F. Bernhart, Ivo L. ...
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    BMCBI
    2006
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    PepDist: A New Framework for Protein-Peptide Binding Prediction based on Learning Peptide Distance Functions
    13 years 5 months ago
    PepDist: A New Framework for Protein-Peptide Binding Prediction based on Learning Peptide Distance Functions
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    Background: Many different aspects of cellular signalling, trafficking and targeting mechanisms are mediated by interactions between proteins and peptides. Representative examples...
    Tomer Hertz, Chen Yanover
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    SMA
    2008
    ACM
    150views Solid Modeling» more  SMA 2008»
    Surface matching using consistent pants decomposition
    13 years 5 months ago
    Surface matching using consistent pants decomposition
    Download  www.ece.lsu.edu
    Surface matching is fundamental to shape computing and various downstream applications. This paper develops a powerful pants decomposition framework for computing maps between sur...
    Xin Li, Xianfeng Gu, Hong Qin
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