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BMCBI
2010
127views more  BMCBI 2010»
13 years 4 months ago
SplicerAV: a tool for mining microarray expression data for changes in RNA processing
Background: Over the past two decades more than fifty thousand unique clinical and biological samples have been assayed using the Affymetrix HG-U133 and HG-U95 GeneChip microarray...
Timothy J. Robinson, Michaela A. Dinan, Mark Dewhi...
NAR
2011
195views Computer Vision» more  NAR 2011»
12 years 7 months ago
MitoGenesisDB: an expression data mining tool to explore spatio-temporal dynamics of mitochondrial biogenesis
Mitochondria constitute complex and flexible cellular entities, which play crucial roles in normal and pathological cell conditions. The database MitoGenesisDB focuses on the dyna...
Jean-Christophe Gelly, Mickael Orgeur, Claude Jacq...
BMCBI
2006
160views more  BMCBI 2006»
13 years 4 months ago
MIMAS: an innovative tool for network-based high density oligonucleotide microarray data management and annotation
Background: The high-density oligonucleotide microarray (GeneChip) is an important tool for molecular biological research aiming at large-scale detection of small nucleotide polym...
Leandro Hermida, Olivier Schaad, Philippe Demougin...
NAR
2011
208views Computer Vision» more  NAR 2011»
12 years 7 months ago
Tomato Functional Genomics Database: a comprehensive resource and analysis package for tomato functional genomics
Tomato Functional Genomics Database (TFGD) provides a comprehensive resource to store, query, mine, analyze, visualize and integrate large-scale tomato functional genomics data se...
Zhangjun Fei, Je-Gun Joung, Xuemei Tang, Yi Zheng,...
BMCBI
2008
100views more  BMCBI 2008»
13 years 4 months ago
easyExon - A Java-based GUI tool for processing and visualization of Affymetrix exon array data
Background: Alternative RNA splicing greatly increases proteome diversity and thereby contribute to species- or tissue-specific functions. The possibility to study alternative spl...
Ting-Yu Chang, Yin-Yi Li, Chih-Hung Jen, Tsun-Po Y...