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» Structuring heterogeneous biological information using fuzzy...
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SDM
2007
SIAM
177views Data Mining» more  SDM 2007»
13 years 6 months ago
Multi-way Clustering on Relation Graphs
A number of real-world domains such as social networks and e-commerce involve heterogeneous data that describes relations between multiple classes of entities. Understanding the n...
Arindam Banerjee, Sugato Basu, Srujana Merugu
BMCBI
2008
116views more  BMCBI 2008»
13 years 4 months ago
A novel representation of RNA secondary structure based on element-contact graphs
Background: Depending on their specific structures, noncoding RNAs (ncRNAs) play important roles in many biological processes. Interest in developing new topological indices based...
Wenjie Shu, Xiaochen Bo, Zhiqiang Zheng, Shengqi W...
BMCBI
2007
227views more  BMCBI 2007»
13 years 4 months ago
Growing functional modules from a seed protein via integration of protein interaction and gene expression data
Background: Nowadays modern biology aims at unravelling the strands of complex biological structures such as the protein-protein interaction (PPI) networks. A key concept in the o...
Ioannis A. Maraziotis, Konstantina Dimitrakopoulou...
BMCBI
2006
116views more  BMCBI 2006»
13 years 4 months ago
Cluster analysis for DNA methylation profiles having a detection threshold
Background: DNA methylation, a molecular feature used to investigate tumor heterogeneity, can be measured on many genomic regions using the MethyLight technology. Due to the combi...
Paul Marjoram, Jing Chang, Peter W. Laird, Kimberl...
NAR
2008
175views more  NAR 2008»
13 years 4 months ago
Onto-CC: a web server for identifying Gene Ontology conceptual clusters
The Gene Ontology (GO) vocabulary has been extensively explored to analyze the functions of coexpressed genes. However, despite its extended use in Biology and Medical Sciences, t...
Rocío Romero-Záliz, Coral del Val, J...