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ECOOP
1997
Springer
13 years 9 months ago
Subtyping Is Not a Good "Match" for Object-Oriented Languages
We present the design and rationale of a new statically-typed object-oriented language, LOOM. LOOM retains most of the features of the earlier language PolyTOIL. However the subtyp...
Kim B. Bruce, Leaf Petersen, Adrian Fiech
BMCBI
2011
13 years 14 days ago
Detection of viral sequence fragments of HIV-1 subfamilies yet unknown
Background: Methods of determining whether or not any particular HIV-1 sequence stems - completely or in part - from some unknown HIV-1 subtype are important for the design of vac...
Thomas Unterthiner, Anne-Kathrin Schultz, Jan Bull...
BMCBI
2007
115views more  BMCBI 2007»
13 years 5 months ago
Comparing sequences without using alignments: application to HIV/SIV subtyping
Background: In general, the construction of trees is based on sequence alignments. This procedure, however, leads to loss of informationwhen parts of sequence alignments (for inst...
Gilles Didier, Laurent Debomy, Maude Pupin, Ming Z...
ICDT
2009
ACM
128views Database» more  ICDT 2009»
14 years 6 months ago
Efficient asymmetric inclusion between regular expression types
The inclusion of Regular Expressions (REs) is the kernel of any type-checking algorithm for XML manipulation languages. XML applications would benefit from the extension of REs wi...
Dario Colazzo, Giorgio Ghelli, Carlo Sartiani
BMCBI
2010
104views more  BMCBI 2010»
13 years 5 months ago
A novel chemogenomics analysis of G protein-coupled receptors (GPCRs) and their ligands: a potential strategy for receptor de-or
Background: G protein-coupled receptors (GPCRs) represent a family of well-characterized drug targets with significant therapeutic value. Phylogenetic classifications may help to ...
Eelke van der Horst, Julio E. Peironcely, Adriaan ...