6 search results - page 1 / 2 » Suffix Arrays: A New Method for On-Line String Searches |
SODA
1990
ACM
13 years 6 months ago
1990
ACM
A new and conceptually simple data structure, called a suffix array, for on-line string searches is introduced in this paper. Constructing and querying suffix arrays is reduced to...
GCB
2004
Springer
13 years 8 months ago
2004
Springer
: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs. In this paper, we present a new nonheuristic algorithm, ...
BMCBI
2011
12 years 8 months ago
2011
Background: The secondary structure of RNA molecules is intimately related to their function and often more conserved than the sequence. Hence, the important task of searching dat...
BMCBI
2006
13 years 5 months ago
2006
Background: In biological sequence analysis, position specific scoring matrices (PSSMs) are widely used to represent sequence motifs in nucleotide as well as amino acid sequences....
BMCBI
2008
13 years 5 months ago
2008
Background: The use of novel algorithmic techniques is pivotal to many important problems in life science. For example the sequencing of the human genome [1] would not have been p...