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» Supervised inference of gene-regulatory networks
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ICIC
2009
Springer
13 years 3 months ago
Inference of Differential Equation Models by Multi Expression Programming for Gene Regulatory Networks
This paper presents an evolutionary method for identifying the gene regulatory network from the observed time series data of gene expression using a system of ordinary differential...
Bin Yang, Yuehui Chen, Qingfang Meng
JCP
2006
157views more  JCP 2006»
13 years 6 months ago
CF-GeNe: Fuzzy Framework for Robust Gene Regulatory Network Inference
Most Gene Regulatory Network (GRN) studies ignore the impact of the noisy nature of gene expression data despite its significant influence upon inferred results. This paper present...
Muhammad Shoaib B. Sehgal, Iqbal Gondal, Laurence ...
BMCBI
2010
172views more  BMCBI 2010»
13 years 6 months ago
Comparison of evolutionary algorithms in gene regulatory network model inference
Background: The evolution of high throughput technologies that measure gene expression levels has created a data base for inferring GRNs (a process also known as reverse engineeri...
Alina Sîrbu, Heather J. Ruskin, Martin Crane
GECCO
2004
Springer
138views Optimization» more  GECCO 2004»
13 years 11 months ago
Comparing Genetic Programming and Evolution Strategies on Inferring Gene Regulatory Networks
Abstract. In recent years several strategies for inferring gene regulatory networks from observed time series data of gene expression have been suggested based on Evolutionary Algo...
Felix Streichert, Hannes Planatscher, Christian Sp...
GCB
2005
Springer
138views Biometrics» more  GCB 2005»
13 years 11 months ago
Inferring Regulatory Systems with Noisy Pathway Information
: With increasing number of pathways available in public databases, the process of inferring gene regulatory networks becomes more and more feasible. The major problem of most of t...
Christian Spieth, Felix Streichert, Nora Speer, An...