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BMCBI
2004
144views more  BMCBI 2004»
13 years 5 months ago
PASBio: predicate-argument structures for event extraction in molecular biology
Background: The exploitation of information extraction (IE), a technology aiming to provide instances of structured representations from free-form text, has been rapidly growing w...
Tuangthong Wattarujeekrit, Parantu K. Shah, Nigel ...
XSYM
2009
Springer
139views Database» more  XSYM 2009»
13 years 12 months ago
A Data Parallel Algorithm for XML DOM Parsing
Abstract. The extensible markup language XML has become the de facto standard for information representation and interchange on the Internet. XML parsing is a core operation perfor...
Bhavik Shah, Praveen Rao, Bongki Moon, Mohan Rajag...
APVIS
2009
13 years 6 months ago
Visualization of signal transduction processes in the crowded environment of the cell
In this paper, we propose a stochastic simulation to model and analyze cellular signal transduction. The high number of objects in a simulation requires advanced visualization tec...
Martin Falk, Michael Klann, Matthias Reuss, Thomas...
CORR
2010
Springer
160views Education» more  CORR 2010»
13 years 5 months ago
Scalable Probabilistic Databases with Factor Graphs and MCMC
Incorporating probabilities into the semantics of incomplete databases has posed many challenges, forcing systems to sacrifice modeling power, scalability, or treatment of relatio...
Michael L. Wick, Andrew McCallum, Gerome Miklau
KDD
2009
ACM
180views Data Mining» more  KDD 2009»
13 years 10 months ago
Parallel community detection on large networks with propinquity dynamics
Graphs or networks can be used to model complex systems. Detecting community structures from large network data is a classic and challenging task. In this paper, we propose a nove...
Yuzhou Zhang, Jianyong Wang, Yi Wang, Lizhu Zhou