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» TabSQL: a MySQL tool to facilitate mapping user data to publ...
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BMCBI
2010
112views more  BMCBI 2010»
13 years 5 months ago
TabSQL: a MySQL tool to facilitate mapping user data to public databases
Background: With advances in high-throughput genomics and proteomics, it is challenging for biologists to deal with large data files and to map their data to annotations in public...
Xiaoqin Xia, Michael McClelland, Yipeng Wang
BMCBI
2006
167views more  BMCBI 2006»
13 years 5 months ago
The bovine QTL viewer: a web accessible database of bovine Quantitative Trait Loci
Background: Many important agricultural traits such as weight gain, milk fat content and intramuscular fat (marbling) in cattle are quantitative traits. Most of the information on...
Pavana Polineni, Prathyusha Aragonda, Suresh R. Xa...
NAR
2011
172views Computer Vision» more  NAR 2011»
12 years 7 months ago
NGSmethDB: a database for next-generation sequencing single-cytosine-resolution DNA methylation data
Next-generation sequencing (NGS) together with bisulphite conversion allows the generation of whole genome methylation maps at single-cytosine resolution. This allows studying the...
Michael Hackenberg, Guillermo Barturen, José...
SEMCO
2008
IEEE
13 years 11 months ago
OPTIMA: Tool for Ontology Alignment with Application to Semantic Reconciliation of Sensor Metadata for Publication in SensorMap
We present Optima, a state of the art general purpose tool for ontology alignment that automatically identifies and matches relevant concepts between ontologies. The tool is supp...
Ravikanth Kolli, Prashant Doshi
BMCBI
2006
172views more  BMCBI 2006»
13 years 5 months ago
BioWarehouse: a bioinformatics database warehouse toolkit
Background: This article addresses the problem of interoperation of heterogeneous bioinformatics databases. Results: We introduce BioWarehouse, an open source toolkit for construc...
Thomas J. Lee, Yannick Pouliot, Valerie Wagner, Pr...