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BMCBI
2006
140views more  BMCBI 2006»
13 years 5 months ago
SNP-PHAGE - High throughput SNP discovery pipeline
Background: Single nucleotide polymorphisms (SNPs) as defined here are single base sequence changes or short insertion/deletions between or within individuals of a given species. ...
Lakshmi K. Matukumalli, John J. Grefenstette, Davi...
BMCBI
2007
95views more  BMCBI 2007»
13 years 5 months ago
Methods for estimating human endogenous retrovirus activities from EST databases
Background: Human endogenous retroviruses (HERVs) are surviving traces of ancient retrovirus infections and now reside within the human DNA. Recently HERV expression has been dete...
Merja Oja, Jaakko Peltonen, Jonas Blomberg, Samuel...
BMCBI
2005
134views more  BMCBI 2005»
13 years 5 months ago
Systematic feature evaluation for gene name recognition
In task 1A of the BioCreAtIvE evaluation, systems had to be devised that recognize words and phrases forming gene or protein names in natural language sentences. We approach this ...
Jörg Hakenberg, Steffen Bickel, Conrad Plake,...
JUCS
2007
84views more  JUCS 2007»
13 years 5 months ago
Improving the Performance of a Tagger Generator in an Information Extraction Application
: In this paper we present an experience in the extraction of named entities from Spanish texts using stacking. Named Entity Extraction (NEE) is a subtask of Information Extraction...
José A. Troyano, Fernando Enríquez, ...
BMCBI
2004
176views more  BMCBI 2004»
13 years 5 months ago
Boosting accuracy of automated classification of fluorescence microscope images for location proteomics
Background: Detailed knowledge of the subcellular location of each expressed protein is critical to a full understanding of its function. Fluorescence microscopy, in combination w...
Kai Huang, Robert F. Murphy