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ICANNGA
2007
Springer
149views Algorithms» more  ICANNGA 2007»
13 years 11 months ago
Using Real-Valued Meta Classifiers to Integrate and Contextualize Binding Site Predictions
Currently the best algorithms for transcription factor binding site predictions are severely limited in accuracy. However, a non-linear combination of these algorithms could improv...
Mark Robinson, Offer Sharabi, Yi Sun, Rod Adams, R...
BMCBI
2007
140views more  BMCBI 2007»
13 years 5 months ago
Prediction potential of candidate biomarker sets identified and validated on gene expression data from multiple datasets
Background: Independently derived expression profiles of the same biological condition often have few genes in common. In this study, we created populations of expression profiles...
Michael Gormley, William Dampier, Adam Ertel, Bilg...
NIPS
2007
13 years 6 months ago
Near-Maximum Entropy Models for Binary Neural Representations of Natural Images
Maximum entropy analysis of binary variables provides an elegant way for studying the role of pairwise correlations in neural populations. Unfortunately, these approaches suffer f...
Matthias Bethge, Philipp Berens
BMCBI
2008
145views more  BMCBI 2008»
13 years 5 months ago
Mapping gene expression quantitative trait loci by singular value decomposition and independent component analysis
Background: The combination of gene expression profiling with linkage analysis has become a powerful paradigm for mapping gene expression quantitative trait loci (eQTL). To date, ...
Shameek Biswas, John D. Storey, Joshua M. Akey
BMCBI
2006
137views more  BMCBI 2006»
13 years 5 months ago
GOPET: A tool for automated predictions of Gene Ontology terms
Background: Vast progress in sequencing projects has called for annotation on a large scale. A Number of methods have been developed to address this challenging task. These method...
Arunachalam Vinayagam, Coral del Val, Falk Schuber...