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IPPS
2007
IEEE
13 years 11 months ago
RAxML-Cell: Parallel Phylogenetic Tree Inference on the Cell Broadband Engine
Computational phylogeny is a challenging application even for the most powerful supercomputers. It is also an ideal candidate for benchmarking emerging multiprocessor architecture...
Filip Blagojevic, Alexandros Stamatakis, Christos ...
JPDC
2010
137views more  JPDC 2010»
13 years 3 months ago
Parallel exact inference on the Cell Broadband Engine processor
—We present the design and implementation of a parallel exact inference algorithm on the Cell Broadband Engine (Cell BE). Exact inference is a key problem in exploring probabilis...
Yinglong Xia, Viktor K. Prasanna
PC
2007
161views Management» more  PC 2007»
13 years 4 months ago
High performance combinatorial algorithm design on the Cell Broadband Engine processor
The Sony–Toshiba–IBM Cell Broadband Engine (Cell/B.E.) is a heterogeneous multicore architecture that consists of a traditional microprocessor (PPE) with eight SIMD co-process...
David A. Bader, Virat Agarwal, Kamesh Madduri, Seu...
BMCBI
2010
175views more  BMCBI 2010»
13 years 4 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...