A central problem in historical linguistics is the identification of historically related cognate words. We present a generative phylogenetic model for automatically inducing cogn...
We study a new data mining problem concerning the discovery of frequent agreement subtrees (FASTs) from a set of phylogenetic trees. A phylogenetic tree, or phylogeny, is an unorde...
In [3], the authors introduced the Generalised Character Compatibility Problem as a generalisation of the Perfect Phylogeny Problem for a set of species. This generalised problem t...
Background: The development, in the last decade, of stochastic heuristics implemented in robust application softwares has made large phylogeny inference a key step in most compara...
Phylogenetic analysis and examination of protein domains allow accurate genome annotation and are invaluable to study proteins and protein complex evolution. However, two sequence...
Blaise T. F. Alako, Daphne Rainey, Harm Nijveen, J...