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» The Ephemeral Pairing Problem
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BMCBI
2011
12 years 9 months ago
Protein alignment algorithms with an efficient backtracking routine on multiple GPUs
Background: Pairwise sequence alignment methods are widely used in biological research. The increasing number of sequences is perceived as one of the upcoming challenges for seque...
Jacek Blazewicz, Wojciech Frohmberg, Michal Kierzy...
BMCBI
2011
12 years 9 months ago
Inference of Chromosome-Specific Copy Numbers Using Population Haplotypes
Background: Using microarray and sequencing platforms, a large number of copy number variations (CNVs) have been identified in humans. In practice, because our human genome is a d...
Yao-Ting Huang, Min-Han Wu
INFOCOM
2011
IEEE
12 years 9 months ago
Fully secure pairwise and triple key distribution in wireless sensor networks using combinatorial designs
—We address pairwise and (for the first time) triple key establishment problems in wireless sensor networks (WSN). We use combinatorial designs to establish pairwise keys betwee...
Sushmita Ruj, Amiya Nayak, Ivan Stojmenovic
SIGMOD
2012
ACM
288views Database» more  SIGMOD 2012»
11 years 8 months ago
Exploiting MapReduce-based similarity joins
Cloud enabled systems have become a crucial component to efficiently process and analyze massive amounts of data. One of the key data processing and analysis operations is the Sim...
Yasin N. Silva, Jason M. Reed
EDBT
2012
ACM
291views Database» more  EDBT 2012»
11 years 8 months ago
Relevance search in heterogeneous networks
Conventional research on similarity search focuses on measuring the similarity between objects with the same type. However, in many real-world applications, we need to measure the...
Chuan Shi, Xiangnan Kong, Philip S. Yu, Sihong Xie...