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BMCBI
2006
136views more  BMCBI 2006»
13 years 4 months ago
Java GUI for InterProScan (JIPS): A tool to help process multiple InterProScans and perform ortholog analysis
Background: Recent, rapid growth in the quantity of available genomic data has generated many protein sequences that are not yet biochemically classified. Thus, the prediction of ...
Aijazuddin Syed, Chris Upton
SIGCSE
2002
ACM
211views Education» more  SIGCSE 2002»
13 years 4 months ago
To java.net and beyond: teaching networking concepts using the Java networking API
This paper covers the use of Java and its API for developing networking programs in an undergraduate computer networks class. Through the use of TCP and UDP sockets provided in th...
Greg Gagne
SIGCSE
2004
ACM
99views Education» more  SIGCSE 2004»
13 years 10 months ago
Java IO and testing made simple
We present software tools that support robust input processing and comprehensive testing in Java. The software includes the JPT library that supports error-checked typed input via...
Viera K. Proulx, Richard Rasala
IPPS
2003
IEEE
13 years 10 months ago
Dynamically Loaded Classes as Shared Libraries: An Approach to Improving Virtual Machine Scalability
Sharing selected data structures among virtual machines of a safe language can improve resource utilization of each participating run-time system. The challenge is to determine wh...
Bernard Wong, Grzegorz Czajkowski, Laurent Dayn&eg...
KDD
2006
ACM
222views Data Mining» more  KDD 2006»
14 years 5 months ago
A component-based framework for knowledge discovery in bioinformatics
Motivation: In the field of bioinformatics there is an emerging need to integrate all knowledge discovery steps into a standardized modular framework. Indeed, component-based deve...
Julien Etienne, Bernd Wachmann, Lei Zhang