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BMCBI
2006
172views more  BMCBI 2006»
13 years 5 months ago
A novel scoring schema for peptide identification by searching protein sequence databases using tandem mass spectrometry data
Background: Tandem mass spectrometry (MS/MS) is a powerful tool for protein identification. Although great efforts have been made in scoring the correlation between tandem mass sp...
Zhuo Zhang, Shiwei Sun, Xiaopeng Zhu, Suhua Chang,...
ASC
2011
12 years 12 months ago
A note on the learning automata based algorithms for adaptive parameter selection in PSO
: PSO, like many stochastic search methods, is very sensitive to efficient parameter setting such that modifying a single parameter may cause a considerable change in the result. I...
Ali B. Hashemi, Mohammad Reza Meybodi
BMCBI
2011
12 years 8 months ago
Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Background: The Smith-Waterman algorithm for local sequence alignment is more sensitive than heuristic methods for database searching, but also more time-consuming. The fastest ap...
Torbjørn Rognes